recipe bioconductor-cmap2data

Connectivity Map (version 2) Data

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/cMap2data.html

License:

GPL-3

Recipe:

/bioconductor-cmap2data/meta.yaml

Data package which provides default drug profiles for the DrugVsDisease package as well as associated gene lists and data clusters used by the DrugVsDisease package.

package bioconductor-cmap2data

Versions:

1.34.0-0,  1.33.0-0,  1.30.0-1,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.25.0-0,  1.24.0-0, 

1.34.0-0,  1.33.0-0,  1.30.0-1,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.25.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.20.0-0,  1.18.0-0,  1.16.0-0,  1.14.0-0

Depends:

• bioconductor-data-packages >=20221110

• curl

• r-base >=4.2,<4.3.0a0

Required By:

• bioconductor-drugvsdisease

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-cmap2data

and update with:

conda update bioconductor-cmap2data

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cmap2data:<tag>

(see bioconductor-cmap2data/tags for valid values for <tag>)

Download stats

Link to this page

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