recipe bioconductor-consensusde

RNA-seq analysis using multiple algorithms

Homepage

https://bioconductor.org/packages/3.10/bioc/html/consensusDE.html

License

GPL-3

Recipe

/bioconductor-consensusde/meta.yaml

This package allows users to perform DE analysis using multiple algorithms. It seeks consensus from multiple methods. Currently it supports “Voom”, “EdgeR” and “DESeq”. It uses RUV-seq (optional) to remove unwanted sources of variation.

package bioconductor-consensusde

(downloads) docker_bioconductor-consensusde

Versions

1.4.0-1, 1.2.1-0, 1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-consensusde

and update with:

conda update bioconductor-consensusde

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-consensusde:<tag>

(see bioconductor-consensusde/tags for valid values for <tag>)