recipe bioconductor-copa

Functions to perform cancer outlier profile analysis.

Homepage

https://bioconductor.org/packages/3.14/bioc/html/copa.html

License

Artistic-2.0

Recipe

/bioconductor-copa/meta.yaml

COPA is a method to find genes that undergo recurrent fusion in a given cancer type by finding pairs of genes that have mutually exclusive outlier profiles.

package bioconductor-copa

(downloads) docker_bioconductor-copa

Versions

1.62.0-11.62.0-01.60.0-01.58.0-11.58.0-01.56.0-01.54.0-01.52.0-11.50.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-copa

and update with:

conda update bioconductor-copa

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-copa:<tag>

(see bioconductor-copa/tags for valid values for <tag>)

Download stats