- recipe bioconductor-copynumberplots
Create Copy-Number Plots using karyoploteR functionality
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/CopyNumberPlots.html
- License:
Artistic-2.0
- Recipe:
CopyNumberPlots have a set of functions extending karyoploteRs functionality to create beautiful, customizable and flexible plots of copy-number related data.
- package bioconductor-copynumberplots¶
-
- Versions:
1.14.0-0
,1.10.0-0
,1.8.0-0
,1.6.0-1
,1.6.0-0
,1.4.0-0
,1.2.0-0
,1.0.1-0
- Depends:
bioconductor-cn.mops
>=1.44.0,<1.45.0
bioconductor-genomeinfodb
>=1.34.0,<1.35.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-iranges
>=2.32.0,<2.33.0
bioconductor-karyoploter
>=1.24.0,<1.25.0
bioconductor-regioner
>=1.30.0,<1.31.0
bioconductor-rhdf5
>=2.42.0,<2.43.0
bioconductor-rsamtools
>=2.14.0,<2.15.0
bioconductor-summarizedexperiment
>=1.28.0,<1.29.0
bioconductor-variantannotation
>=1.44.0,<1.45.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-copynumberplots
and update with:
conda update bioconductor-copynumberplots
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-copynumberplots:<tag>
(see bioconductor-copynumberplots/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-copynumberplots/README.html)