recipe bioconductor-crimage

CRImage a package to classify cells and calculate tumour cellularity

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/CRImage.html

License:

Artistic-2.0

Recipe:

/bioconductor-crimage/meta.yaml

Links:

biotools: crimage, doi: 10.1126/scitranslmed.3004330

CRImage provides functionality to process and analyze images, in particular to classify cells in biological images. Furthermore, in the context of tumor images, it provides functionality to calculate tumour cellularity.

package bioconductor-crimage

Versions:

1.46.0-0,  1.42.0-0,  1.40.0-0,  1.38.0-1,  1.38.0-0,  1.36.0-0,  1.34.0-0,  1.32.0-1,  1.30.0-0, 

1.46.0-0,  1.42.0-0,  1.40.0-0,  1.38.0-1,  1.38.0-0,  1.36.0-0,  1.34.0-0,  1.32.0-1,  1.30.0-0,  1.28.0-0,  1.26.0-0

Depends:

• bioconductor-acgh >=1.76.0,<1.77.0

• bioconductor-dnacopy >=1.72.0,<1.73.0

• bioconductor-ebimage >=4.40.0,<4.41.0

• r-base >=4.2,<4.3.0a0

• r-e1071

• r-foreach

• r-mass

• r-sgeostat

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-crimage

and update with:

conda update bioconductor-crimage

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-crimage:<tag>

(see bioconductor-crimage/tags for valid values for <tag>)

Download stats

Link to this page

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