- recipe bioconductor-crimage
CRImage a package to classify cells and calculate tumour cellularity
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/CRImage.html
- License:
Artistic-2.0
- Recipe:
- Links:
biotools: crimage, doi: 10.1126/scitranslmed.3004330
CRImage provides functionality to process and analyze images, in particular to classify cells in biological images. Furthermore, in the context of tumor images, it provides functionality to calculate tumour cellularity.
- package bioconductor-crimage¶
-
- Versions:
1.46.0-0
,1.42.0-0
,1.40.0-0
,1.38.0-1
,1.38.0-0
,1.36.0-0
,1.34.0-0
,1.32.0-1
,1.30.0-0
,1.46.0-0
,1.42.0-0
,1.40.0-0
,1.38.0-1
,1.38.0-0
,1.36.0-0
,1.34.0-0
,1.32.0-1
,1.30.0-0
,1.28.0-0
,1.26.0-0
- Depends:
bioconductor-acgh
>=1.76.0,<1.77.0
bioconductor-dnacopy
>=1.72.0,<1.73.0
bioconductor-ebimage
>=4.40.0,<4.41.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-crimage
and update with:
conda update bioconductor-crimage
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-crimage:<tag>
(see bioconductor-crimage/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-crimage/README.html)