recipe bioconductor-crisprvariants

CrispRVariants provides tools for analysing the results of a CRISPR-Cas9 mutagenesis sequencing experiment, or other sequencing experiments where variants within a given region are of interest. These tools allow users to localize variant allele combinations with respect to any genomic location (e.g. the Cas9 cut site), plot allele combinations and calculate mutation rates with flexible filtering of unrelated variants.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/CrispRVariants.html

License

GPL-2

Recipe

/bioconductor-crisprvariants/meta.yaml

Links

biotools: crisprvariants

package bioconductor-crisprvariants

(downloads) docker_bioconductor-crisprvariants

Versions

1.12.0-1, 1.10.0-0, 1.8.0-0, 1.6.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-crisprvariants

and update with:

conda update bioconductor-crisprvariants

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-crisprvariants:<tag>

(see bioconductor-crisprvariants/tags for valid values for <tag>)