recipe bioconductor-cummerbund

Analysis, exploration, manipulation, and visualization of Cufflinks high-throughput sequencing data.

Homepage

https://bioconductor.org/packages/3.11/bioc/html/cummeRbund.html

License

Artistic-2.0

Recipe

/bioconductor-cummerbund/meta.yaml

Links

biotools: cummerbund, doi: 10.1038/nprot.2012.016

Allows for persistent storage, access, exploration, and manipulation of Cufflinks high-throughput sequencing data. In addition, provides numerous plotting functions for commonly used visualizations.

package bioconductor-cummerbund

(downloads) docker_bioconductor-cummerbund

Versions
2.30.0-02.28.0-02.26.0-12.24.0-02.22.0-02.20.0-02.18.0-02.16.0-02.12.1-1

2.30.0-02.28.0-02.26.0-12.24.0-02.22.0-02.20.0-02.18.0-02.16.0-02.12.1-12.12.1-02.8.2-12.8.2-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-cummerbund

and update with:

conda update bioconductor-cummerbund

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cummerbund:<tag>

(see bioconductor-cummerbund/tags for valid values for <tag>)