recipe bioconductor-curatedadipochip

A Curated ChIP-Seq Dataset of MDI-induced Differentiated Adipocytes (3T3-L1)

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/curatedAdipoChIP.html

License:

GPL-3

Recipe:

/bioconductor-curatedadipochip/meta.yaml

A curated dataset of publicly available ChIP-sequencing of transcription factors, chromatin remodelers and histone modifications in the 3T3-L1 pre-adipocyte cell line. The package document the data collection, pre-processing and processing of the data. In addition to the documentation, the package contains the scripts that was used to generated the data.

package bioconductor-curatedadipochip

Versions:

1.14.0-0,  1.10.0-1,  1.10.0-0,  1.8.0-0,  1.6.0-1,  1.6.0-0,  1.4.0-0,  1.2.0-0,  1.0.0-1

Depends:

• bioconductor-data-packages >=20221108

• bioconductor-experimenthub >=2.6.0,<2.7.0

• bioconductor-summarizedexperiment >=1.28.0,<1.29.0

• curl

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-curatedadipochip

and update with:

conda update bioconductor-curatedadipochip

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-curatedadipochip:<tag>

(see bioconductor-curatedadipochip/tags for valid values for <tag>)

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