recipe bioconductor-cytofpower

Power analysis for CyTOF experiments

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/CyTOFpower.html

License:

LGPL-3

Recipe:

/bioconductor-cytofpower/meta.yaml

This package is a tool to predict the power of CyTOF experiments in the context of differential state analyses. The package provides a shiny app with two options to predict the power of an experiment: i. generation of in-sicilico CyTOF data, using users input ii. browsing in a grid of parameters for which the power was already precomputed.

package bioconductor-cytofpower

Versions:

1.4.0-0,  1.0.0-0

Depends:

• bioconductor-cytoglmm >=1.6.0,<1.7.0

• bioconductor-diffcyt >=1.18.0,<1.19.0

• bioconductor-summarizedexperiment >=1.28.0,<1.29.0

• r-base >=4.2,<4.3.0a0

• r-dplyr

• r-dt

• r-ggplot2

• r-magrittr

• r-rlang

• r-shiny

• r-shinyfeedback

• r-shinyjs

• r-shinymatrix

• r-tibble

• r-tidyr

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-cytofpower

and update with:

conda update bioconductor-cytofpower

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cytofpower:<tag>

(see bioconductor-cytofpower/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-cytofpower/README.html)