recipe bioconductor-dapar

This package contains a collection of functions for the visualisation and the statistical analysis of proteomic data.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/DAPAR.html

License

Artistic-2.0

Recipe

/bioconductor-dapar/meta.yaml

package bioconductor-dapar

(downloads) docker_bioconductor-dapar

Versions

1.14.4-0

Depends bioconductor-annotationdbi

>=1.44.0,<1.45.0

Depends bioconductor-clusterprofiler

>=3.10.0,<3.11.0

Depends bioconductor-dapardata

>=1.12.0,<1.13.0

Depends bioconductor-graph

>=1.60.0,<1.61.0

Depends bioconductor-impute

>=1.56.0,<1.57.0

Depends bioconductor-limma

>=3.38.0,<3.39.0

Depends bioconductor-msnbase

>=2.8.0,<2.9.0

Depends bioconductor-pcamethods

>=1.74.0,<1.75.0

Depends bioconductor-preprocesscore

>=1.44.0,<1.45.0

Depends bioconductor-siggenes

>=1.56.0,<1.57.0

Depends bioconductor-vsn

>=3.50.0,<3.51.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-cairo

Depends r-cp4p

>=0.3.5

Depends r-doparallel

Depends r-dplyr

Depends r-factoextra

Depends r-factominer

Depends r-foreach

Depends r-ggplot2

Depends r-gplots

Depends r-highcharter

>=0.5.0

Depends r-imp4p

>=0.7

Depends r-knitr

Depends r-lattice

Depends r-lme4

Depends r-matrix

Depends r-norm

Depends r-openxlsx

Depends r-png

Depends r-rcolorbrewer

Depends r-readxl

Depends r-reshape2

Depends r-scales

Depends r-stringr

Depends r-tidyr

Depends r-tidyverse

Depends r-tmvtnorm

Depends r-vioplot

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-dapar

and update with:

conda update bioconductor-dapar

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-dapar:<tag>

(see bioconductor-dapar/tags for valid values for <tag>)