recipe bioconductor-dapardata

Data accompanying the DAPAR and Prostar packages






Mass-spectrometry based UPS proteomics data sets from Ramus C, Hovasse A, Marcellin M, Hesse AM, Mouton-Barbosa E, Bouyssie D, Vaca S, Carapito C, Chaoui K, Bruley C, Garin J, Cianferani S, Ferro M, Dorssaeler AV, Burlet-Schiltz O, Schaeffer C, Coute Y, Gonzalez de Peredo A. Spiked proteomic standard dataset for testing label-free quantitative software and statistical methods. Data Brief. 2015 Dec 17;6:286-94 and Giai Gianetto, Q., Combes, F., Ramus, C., Bruley, C., Coute, Y., Burger, T. (2016). Calibration plot for proteomics: A graphical tool to visually check the assumptions underlying FDR control in quantitative experiments. Proteomics, 16(1), 29-32.

package bioconductor-dapardata

(downloads) docker_bioconductor-dapardata


1.18.0-0, 1.16.0-0, 1.14.0-1, 1.12.1-0

Required By


With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-dapardata

and update with:

conda update bioconductor-dapardata

or use the docker container:

docker pull<tag>

(see bioconductor-dapardata/tags for valid values for <tag>)