recipe bioconductor-diffutr

diffUTR: Streamlining differential exon and 3' UTR usage

Homepage

https://bioconductor.org/packages/3.14/bioc/html/diffUTR.html

License

GPL-3

Recipe

/bioconductor-diffutr/meta.yaml

The diffUTR package provides a uniform interface and plotting functions for limma/edgeR/DEXSeq -powered differential bin/exon usage. It includes in addition an improved version of the limma::diffSplice method. Most importantly, diffUTR further extends the application of these frameworks to differential UTR usage analysis using poly-A site databases.

package bioconductor-diffutr

(downloads) docker_bioconductor-diffutr

Versions

1.2.0-01.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-diffutr

and update with:

conda update bioconductor-diffutr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-diffutr:<tag>

(see bioconductor-diffutr/tags for valid values for <tag>)

Download stats