Package Recipe 'bioconductor-diggitdata'

recipe bioconductor-diggitdata

Example data for the diggit package

Homepage:: https://bioconductor.org/packages/3.16/data/experiment/html/diggitdata.html
License:: GPL (>=2)
Recipe:: /bioconductor-diggitdata/meta.yaml

This package provides expression profile and CNV data for glioblastoma from TCGA, and transcriptional and post-translational regulatory networks assembled with the ARACNe and MINDy algorithms, respectively.

package bioconductor-diggitdata¶

Versions:

1.30.0-0, 1.26.0-1, 1.26.0-0, 1.24.0-0, 1.22.0-1, 1.22.0-0, 1.21.0-0, 1.20.0-0, 1.18.0-0,

1.30.0-0, 1.26.0-1, 1.26.0-0, 1.24.0-0, 1.22.0-1, 1.22.0-0, 1.21.0-0, 1.20.0-0, 1.18.0-0, 1.16.0-1, 1.14.0-0

Depends:

bioconductor-biobase >=2.58.0,<2.59.0
bioconductor-data-packages >=20221104
bioconductor-viper >=1.32.0,<1.33.0
curl
r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-diggitdata

and update with:

conda update bioconductor-diggitdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-diggitdata:<tag>

(see bioconductor-diggitdata/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-diggitdata/README.html)