- recipe bioconductor-diggitdata
Example data for the diggit package
- Homepage:
https://bioconductor.org/packages/3.16/data/experiment/html/diggitdata.html
- License:
GPL (>=2)
- Recipe:
This package provides expression profile and CNV data for glioblastoma from TCGA, and transcriptional and post-translational regulatory networks assembled with the ARACNe and MINDy algorithms, respectively.
- package bioconductor-diggitdata¶
-
- Versions:
1.30.0-0
,1.26.0-1
,1.26.0-0
,1.24.0-0
,1.22.0-1
,1.22.0-0
,1.21.0-0
,1.20.0-0
,1.18.0-0
,1.30.0-0
,1.26.0-1
,1.26.0-0
,1.24.0-0
,1.22.0-1
,1.22.0-0
,1.21.0-0
,1.20.0-0
,1.18.0-0
,1.16.0-1
,1.14.0-0
- Depends:
bioconductor-biobase
>=2.58.0,<2.59.0
bioconductor-data-packages
>=20221104
bioconductor-viper
>=1.32.0,<1.33.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-diggitdata
and update with:
conda update bioconductor-diggitdata
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-diggitdata:<tag>
(see bioconductor-diggitdata/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-diggitdata/README.html)