recipe bioconductor-dmelsgi

Experimental data and documented source code for the paper "A Map of Directional Genetic Interactions in a Metazoan Cell"

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/DmelSGI.html

License:

Artistic-2.0

Recipe:

/bioconductor-dmelsgi/meta.yaml

The package contains the experimental data and documented source code of the manuscript "Fischer et al., A Map of Directional Genetic Interactions in a Metazoan Cell, eLife, 2015, in Press.". The vignette code generates all figures in the paper.

package bioconductor-dmelsgi

Versions:

1.29.1-0,  1.26.0-1,  1.26.0-0,  1.24.0-0,  1.22.1-0,  1.22.0-0,  1.20.0-0,  1.18.0-0,  1.16.0-1, 

1.29.1-0,  1.26.0-1,  1.26.0-0,  1.24.0-0,  1.22.1-0,  1.22.0-0,  1.20.0-0,  1.18.0-0,  1.16.0-1,  1.16.0-0,  1.14.0-0

Depends:

• bioconductor-data-packages >=20221103

• bioconductor-limma >=3.54.0,<3.55.0

• bioconductor-rhdf5 >=2.42.0,<2.43.0

• curl

• r-abind

• r-base >=4.2,<4.3.0a0

• r-gplots

• r-igraph

• r-knitr

• r-tsp

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-dmelsgi

and update with:

conda update bioconductor-dmelsgi

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-dmelsgi:<tag>

(see bioconductor-dmelsgi/tags for valid values for <tag>)

Download stats

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