recipe bioconductor-dmelsgi

Experimental data and documented source code for the paper "A Map of Directional Genetic Interactions in a Metazoan Cell"

Homepage

https://bioconductor.org/packages/3.11/data/experiment/html/DmelSGI.html

License

Artistic-2.0

Recipe

/bioconductor-dmelsgi/meta.yaml

The package contains the experimental data and documented source code of the manuscript "Fischer et al., A Map of Directional Genetic Interactions in a Metazoan Cell, eLife, 2015, in Press.". The vignette code generates all figures in the paper.

package bioconductor-dmelsgi

Versions

1.20.0-0,  1.18.0-0,  1.16.0-1,  1.16.0-0,  1.14.0-0

Depends

• bioconductor-limma >=3.44.0,<3.45.0

• bioconductor-rhdf5 >=2.32.0,<2.33.0

• curl >=7.69.1,<8.0a0

• r-abind

• r-base >=4.0,<4.1.0a0

• r-gplots

• r-igraph

• r-knitr

• r-tsp

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-dmelsgi

and update with:

conda update bioconductor-dmelsgi

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-dmelsgi:<tag>

(see bioconductor-dmelsgi/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-dmelsgi/README.html)