- recipe bioconductor-dominoeffect
Identification and Annotation of Protein Hotspot Residues
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/DominoEffect.html
- License:
GPL (>= 3)
- Recipe:
The functions support identification and annotation of hotspot residues in proteins. These are individual amino acids that accumulate mutations at a much higher rate than their surrounding regions.
- package bioconductor-dominoeffect¶
-
- Versions:
1.18.0-0
,1.14.0-0
,1.12.0-0
,1.10.0-1
,1.10.0-0
,1.8.0-0
,1.6.0-0
,1.4.0-1
,1.2.1-0
,1.18.0-0
,1.14.0-0
,1.12.0-0
,1.10.0-1
,1.10.0-0
,1.8.0-0
,1.6.0-0
,1.4.0-1
,1.2.1-0
,1.2.0-0
- Depends:
bioconductor-annotationdbi
>=1.60.0,<1.61.0
bioconductor-biomart
>=2.54.0,<2.55.0
bioconductor-biostrings
>=2.66.0,<2.67.0
bioconductor-genomeinfodb
>=1.34.0,<1.35.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-iranges
>=2.32.0,<2.33.0
bioconductor-summarizedexperiment
>=1.28.0,<1.29.0
bioconductor-variantannotation
>=1.44.0,<1.45.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-dominoeffect
and update with:
conda update bioconductor-dominoeffect
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-dominoeffect:<tag>
(see bioconductor-dominoeffect/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-dominoeffect/README.html)