recipe bioconductor-donapllp2013

Supplementary data package for Dona et al. (2013) containing example images and tables

Homepage:

https://bioconductor.org/packages/3.18/data/experiment/html/DonaPLLP2013.html

License:

Artistic-2.0

Recipe:

/bioconductor-donapllp2013/meta.yaml

An experiment data package associated with the publication Dona et al. (2013). Package contains runnable vignettes showing an example image segmentation for one posterior lateral line primordium, and also the data table and code used to analyze tissue-scale lifetime-ratio statistics.

package bioconductor-donapllp2013

(downloads) docker_bioconductor-donapllp2013

versions:
1.40.0-0,  1.38.0-0,  1.35.0-0,  1.32.0-1,  1.32.0-0,  1.30.0-0,  1.28.0-1,  1.28.0-0,  1.27.0-0, 

1.40.0-0,  1.38.0-0,  1.35.0-0,  1.32.0-1,  1.32.0-0,  1.30.0-0,  1.28.0-1,  1.28.0-0,  1.27.0-0,  1.26.0-0,  1.24.0-0,  1.22.0-1,  1.20.0-0

depends bioconductor-data-packages:

>=20231203

depends bioconductor-ebimage:

>=4.44.0,<4.45.0

depends curl:

depends r-base:

>=4.3,<4.4.0a0

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-donapllp2013

and update with::

   mamba update bioconductor-donapllp2013

To create a new environment, run:

mamba create --name myenvname bioconductor-donapllp2013

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/bioconductor-donapllp2013:<tag>

(see `bioconductor-donapllp2013/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-donapllp2013/README.html)