recipe bioconductor-dpeak

dPeak (Deconvolution of Peaks in ChIP-seq Analysis)

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/dpeak.html

License:

GPL (>= 2)

Recipe:

/bioconductor-dpeak/meta.yaml

dPeak is a statistical framework for the high resolution identification of protein-DNA interaction sites using PET and SET ChIP-Seq and ChIP-exo data. It provides computationally efficient and user friendly interface to process ChIP-seq and ChIP-exo data, implement exploratory analysis, fit dPeak model, and export list of predicted binding sites for downstream analysis.

package bioconductor-dpeak

(downloads) docker_bioconductor-dpeak

Versions:

1.10.0-01.6.0-21.6.0-11.6.0-01.4.0-01.2.0-11.2.0-01.0.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-dpeak

and update with:

conda update bioconductor-dpeak

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-dpeak:<tag>

(see bioconductor-dpeak/tags for valid values for <tag>)

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