recipe bioconductor-drugtargetinteractions

Drug-Target Interactions

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/drugTargetInteractions.html

License:

Artistic-2.0

Recipe:

/bioconductor-drugtargetinteractions/meta.yaml

Provides utilities for identifying drug-target interactions for sets of small molecule or gene/protein identifiers. The required drug-target interaction information is obained from a local SQLite instance of the ChEMBL database. ChEMBL has been chosen for this purpose, because it provides one of the most comprehensive and best annotatated knowledge resources for drug-target information available in the public domain.

package bioconductor-drugtargetinteractions

Versions:

1.2.0-0,  1.0.0-0

Depends:

• bioconductor-annotationfilter >=1.18.0,<1.19.0

• bioconductor-biocfilecache >=2.2.0,<2.3.0

• bioconductor-biomart >=2.50.0,<2.51.0

• bioconductor-ensembldb >=2.18.0,<2.19.0

• bioconductor-s4vectors >=0.32.0,<0.33.0

• bioconductor-uniprot.ws >=2.34.0,<2.35.0

• r-base >=4.1,<4.2.0a0

• r-dplyr

• r-rappdirs

• r-rsqlite

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-drugtargetinteractions

and update with:

conda update bioconductor-drugtargetinteractions

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-drugtargetinteractions:<tag>

(see bioconductor-drugtargetinteractions/tags for valid values for <tag>)

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