recipe bioconductor-ebimage

EBImage provides general purpose functionality for image processing and analysis. In the context of (high-throughput) microscopy-based cellular assays, EBImage offers tools to segment cells and extract quantitative cellular descriptors. This allows the automation of such tasks using the R programming language and facilitates the use of other tools in the R environment for signal processing, statistical modeling, machine learning and visualization with image data.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/EBImage.html

License

LGPL

Recipe

/bioconductor-ebimage/meta.yaml

Links

biotools: ebimage

package bioconductor-ebimage

(downloads) docker_bioconductor-ebimage

Versions

4.24.0-0, 4.22.1-0, 4.20.0-0, 4.18.3-0, 4.13.0-0, 4.12.2-0

Depends bioconductor-biocgenerics

>=0.28.0,<0.29.0

Depends libgcc-ng

>=7.3.0

Depends libstdcxx-ng

>=7.3.0

Depends r-abind

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-fftwtools

>=0.9-7

Depends r-htmltools

Depends r-htmlwidgets

Depends r-jpeg

Depends r-locfit

Depends r-png

Depends r-rcurl

Depends r-tiff

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-ebimage

and update with:

conda update bioconductor-ebimage

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ebimage:<tag>

(see bioconductor-ebimage/tags for valid values for <tag>)