recipe bioconductor-egad

Extending guilt by association by degree

Homepage

https://bioconductor.org/packages/3.14/bioc/html/EGAD.html

License

GPL-2

Recipe

/bioconductor-egad/meta.yaml

The package implements a series of highly efficient tools to calculate functional properties of networks based on guilt by association methods.

package bioconductor-egad

Versions

1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.10.0-0

Depends

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-geoquery >=2.62.0,<2.63.0

• bioconductor-impute >=1.68.0,<1.69.0

• bioconductor-limma >=3.50.0,<3.51.0

• r-base >=4.1,<4.2.0a0

• r-gplots

• r-igraph

• r-mass

• r-plyr

• r-rcolorbrewer

• r-rcurl

• r-zoo

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-egad

and update with:

conda update bioconductor-egad

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-egad:<tag>

(see bioconductor-egad/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-egad/README.html)