recipe bioconductor-eisar

Exon-Intron Split Analysis (EISA) in R

Homepage

https://bioconductor.org/packages/3.11/bioc/html/eisaR.html

License

GPL-3

Recipe

/bioconductor-eisar/meta.yaml

Exon-intron split analysis (EISA) uses ordinary RNA-seq data to measure changes in mature RNA and pre-mRNA reads across different experimental conditions to quantify transcriptional and post-transcriptional regulation of gene expression. For details see Gaidatzis et al., Nat Biotechnol 2015. doi: 10.1038/nbt.3269. eisaR implements the major steps of EISA in R.

package bioconductor-eisar

(downloads) docker_bioconductor-eisar

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-eisar

and update with:

conda update bioconductor-eisar

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-eisar:<tag>

(see bioconductor-eisar/tags for valid values for <tag>)