recipe bioconductor-enrichplot

Visualization of Functional Enrichment Result

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/enrichplot.html

License:

Artistic-2.0

Recipe:

/bioconductor-enrichplot/meta.yaml

The 'enrichplot' package implements several visualization methods for interpreting functional enrichment results obtained from ORA or GSEA analysis. It is mainly designed to work with the 'clusterProfiler' package suite. All the visualization methods are developed based on 'ggplot2' graphics.

package bioconductor-enrichplot

Versions:

1.18.0-0,  1.14.1-0,  1.12.0-0,  1.10.2-0,  1.10.0-0,  1.8.1-0,  1.6.0-0,  1.4.0-1,  1.2.0-0, 

1.18.0-0,  1.14.1-0,  1.12.0-0,  1.10.2-0,  1.10.0-0,  1.8.1-0,  1.6.0-0,  1.4.0-1,  1.2.0-0,  1.0.2-0

Depends:

• bioconductor-dose >=3.24.0,<3.25.0

• bioconductor-ggtree >=3.6.0,<3.7.0

• bioconductor-gosemsim >=2.24.0,<2.25.0

• r-aplot >=0.1.4

• r-base >=4.2,<4.3.0a0

• r-ggnewscale

• r-ggplot2

• r-ggraph

• r-igraph

• r-magrittr

• r-plyr

• r-purrr

• r-rcolorbrewer

• r-reshape2

• r-rlang

• r-scatterpie

• r-shadowtext

• r-yulab.utils >=0.0.4

Required By:

• bioconductor-mageckflute

• bioconductor-multisight

• bioconductor-chipseeker

• bioconductor-debrowser

• bioconductor-reactomepa

• bioconductor-clusterprofiler

• r-bcbiornaseq

• bioconductor-microbiomeprofiler

• bioconductor-meshes

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-enrichplot

and update with:

conda update bioconductor-enrichplot

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-enrichplot:<tag>

(see bioconductor-enrichplot/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-enrichplot/README.html)