recipe bioconductor-epivizrdata

Data Management API for epiviz interactive visualization app

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/epivizrData.html

License:

MIT + file LICENSE

Recipe:

/bioconductor-epivizrdata/meta.yaml

Links:

biotools: epivizrdata, doi: 10.1038/nmeth.3252

Serve data from Bioconductor Objects through a WebSocket connection.

package bioconductor-epivizrdata

Versions:

1.26.0-0,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.10.0-0, 

1.26.0-0,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.10.0-0,  1.8.0-0,  1.6.0-0

Depends:

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-ensembldb >=2.22.0,<2.23.0

• bioconductor-epivizrserver >=1.26.0,<1.27.0

• bioconductor-genomeinfodb >=1.34.0,<1.35.0

• bioconductor-genomicfeatures >=1.50.0,<1.51.0

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-iranges >=2.32.0,<2.33.0

• bioconductor-organismdbi >=1.40.0,<1.41.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• bioconductor-summarizedexperiment >=1.28.0,<1.29.0

• r-base >=4.2,<4.3.0a0

Required By:

• bioconductor-epivizrchart

• bioconductor-sctreeviz

• bioconductor-metavizr

• bioconductor-epivizr

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-epivizrdata

and update with:

conda update bioconductor-epivizrdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-epivizrdata:<tag>

(see bioconductor-epivizrdata/tags for valid values for <tag>)

Download stats

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[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-epivizrdata/README.html)