- recipe bioconductor-esetvis
Visualizations of expressionSet Bioconductor object
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/esetVis.html
- License
GPL-3
- Recipe
- Links
biotools: esetvis, doi: 10.1038/nmeth.3252
Utility functions for visualization of expressionSet (or SummarizedExperiment) Bioconductor object, including spectral map, tsne and linear discriminant analysis. Static plot via the ggplot2 package or interactive via the ggvis or rbokeh packages are available.
- package bioconductor-esetvis¶
-
- Versions
1.20.0-0
,1.18.0-0
,1.16.0-1
,1.16.0-0
,1.14.0-0
,1.12.0-0
,1.10.0-1
,1.8.0-0
,1.6.3-0
,1.20.0-0
,1.18.0-0
,1.16.0-1
,1.16.0-0
,1.14.0-0
,1.12.0-0
,1.10.0-1
,1.8.0-0
,1.6.3-0
,1.4.0-0
- Depends
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-mlp
>=1.42.0,<1.43.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-esetvis
and update with:
conda update bioconductor-esetvis
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-esetvis:<tag>
(see bioconductor-esetvis/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-esetvis/README.html)