recipe bioconductor-excluderanges

Genomic coordinates of problematic genomic regions

Homepage:

https://bioconductor.org/packages/3.16/data/annotation/html/excluderanges.html

License:

MIT + file LICENSE

Recipe:

/bioconductor-excluderanges/meta.yaml

Genomic coordinates of problematic genomic regions that should be avoided when working with genomic data. GRanges of exclusion regions (formerly known as blacklisted), centromeres, telomeres, known heterochromatin regions, etc. (UCSC 'gap' table data). Primarily for human and mouse genomes, hg19/hg38 and mm9/mm10 genome assemblies.

package bioconductor-excluderanges

(downloads) docker_bioconductor-excluderanges

Versions:

0.99.6-2,  0.99.6-1,  0.99.6-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-excluderanges

and update with:

conda update bioconductor-excluderanges

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-excluderanges:<tag>

(see bioconductor-excluderanges/tags for valid values for <tag>)

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Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-excluderanges/README.html)