- recipe bioconductor-excluderanges
Genomic coordinates of problematic genomic regions
- Homepage:
https://bioconductor.org/packages/3.16/data/annotation/html/excluderanges.html
- License:
MIT + file LICENSE
- Recipe:
Genomic coordinates of problematic genomic regions that should be avoided when working with genomic data. GRanges of exclusion regions (formerly known as blacklisted), centromeres, telomeres, known heterochromatin regions, etc. (UCSC 'gap' table data). Primarily for human and mouse genomes, hg19/hg38 and mm9/mm10 genome assemblies.
- package bioconductor-excluderanges¶
-
- Versions:
0.99.6-2
,0.99.6-1
,0.99.6-0
- Depends:
bioconductor-data-packages
>=20221102
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-excluderanges
and update with:
conda update bioconductor-excluderanges
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-excluderanges:<tag>
(see bioconductor-excluderanges/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-excluderanges/README.html)