bioconductor-eximir

downloads

This package contains functions for reading raw data in ImaGene TXT format obtained from Exiqon miRCURY LNA arrays, annotating them with appropriate GAL files, and normalizing them using a spike-in probe-based method. Other platforms and data formats are also supported.

Home http://bioconductor.org/packages/3.7/bioc/html/ExiMiR.html
Versions 2.22.0, 2.20.0
License GPL-2
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-eximir
Links biotools: eximir, doi: 10.1186/1756-0500-7-302

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-eximir

and update with:

conda update bioconductor-eximir

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-eximir.