recipe bioconductor-fccac

An application of functional canonical correlation analysis to assess covariance of nucleic acid sequencing datasets such as chromatin immunoprecipitation followed by deep sequencing (ChIP-seq). The package can be used as well with other types of sequencing data such as neMeRIP-seq (PMID: 29489750) or with single cell RNA-seq or epigenome data provided in bigWig format.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/fCCAC.html

License

Artistic-2.0

Recipe

/bioconductor-fccac/meta.yaml

Links

biotools: fccac

package bioconductor-fccac

(downloads) docker_bioconductor-fccac

Versions

1.10.0-1, 1.8.0-0, 1.6.0-0, 1.2.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-fccac

and update with:

conda update bioconductor-fccac

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-fccac:<tag>

(see bioconductor-fccac/tags for valid values for <tag>)