recipe bioconductor-fdrame

FDR adjustments of Microarray Experiments (FDR-AME)

Homepage

https://bioconductor.org/packages/3.11/bioc/html/fdrame.html

License

GPL (>= 2)

Recipe

/bioconductor-fdrame/meta.yaml

This package contains two main functions. The first is fdr.ma which takes normalized expression data array, experimental design and computes adjusted p-values It returns the fdr adjusted p-values and plots, according to the methods described in (Reiner, Yekutieli and Benjamini 2002). The second, is fdr.gui() which creates a simple graphic user interface to access fdr.ma

package bioconductor-fdrame

Versions

1.60.0-0,  1.58.0-0,  1.56.0-1,  1.56.0-0,  1.54.0-0

Depends

• libblas >=3.8.0,<4.0a0

• libgcc-ng >=7.3.0

• liblapack >=3.8.0,<3.9.0a0

• r-base >=4.0,<4.1.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-fdrame

and update with:

conda update bioconductor-fdrame

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-fdrame:<tag>

(see bioconductor-fdrame/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-fdrame/README.html)