recipe bioconductor-fletcher2013b

Master regulators of FGFR2 signalling and breast cancer risk



GPL (>= 2)



This package reproduces the systems biology analysis for the data in package Fletcher2013a using RTN.

package bioconductor-fletcher2013b

(downloads) docker_bioconductor-fletcher2013b



depends bioconductor-data-packages:


depends bioconductor-fletcher2013a:


depends bioconductor-reder:


depends bioconductor-rtn:


depends curl:

depends r-base:


depends r-igraph:

depends r-rcolorbrewer:



You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-fletcher2013b

and update with::

   mamba update bioconductor-fletcher2013b

To create a new environment, run:

mamba create --name myenvname bioconductor-fletcher2013b

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull<tag>

(see `bioconductor-fletcher2013b/tags`_ for valid values for ``<tag>``)

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