recipe bioconductor-flowclust

Clustering for Flow Cytometry

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/flowClust.html

License:

Artistic-2.0

Recipe:

/bioconductor-flowclust/meta.yaml

Robust model-based clustering using a t-mixture model with Box-Cox transformation. Note: users should have GSL installed. Windows users: 'consult the README file available in the inst directory of the source distribution for necessary configuration instructions'.

package bioconductor-flowclust

Versions:

3.32.0-2,  3.32.0-1,  3.32.0-0,  3.30.0-0,  3.28.0-2,  3.28.0-1,  3.28.0-0,  3.26.0-0,  3.24.0-0, 

3.32.0-2,  3.32.0-1,  3.32.0-0,  3.30.0-0,  3.28.0-2,  3.28.0-1,  3.28.0-0,  3.26.0-0,  3.24.0-0,  3.22.0-1,  3.20.0-0

Depends:

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-biocgenerics >=0.40.0,<0.41.0

• bioconductor-flowcore >=2.6.0,<2.7.0

• bioconductor-flowviz >=1.58.0,<1.59.0

• bioconductor-graph >=1.72.0,<1.73.0

• libblas >=3.9.0,<4.0a0

• libgcc-ng >=12

• liblapack >=3.9.0,<4.0a0

• r-base >=4.1,<4.2.0a0

• r-clue

• r-corpcor

• r-ellipse

• r-mnormt

Required By:

• bioconductor-flowmerge

• bioconductor-flowtrans

• bioconductor-opencyto

• bioconductor-cyanofilter

• bioconductor-confess

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-flowclust

and update with:

conda update bioconductor-flowclust

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-flowclust:<tag>

(see bioconductor-flowclust/tags for valid values for <tag>)

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