recipe bioconductor-flowclust

Clustering for Flow Cytometry

Homepage

https://bioconductor.org/packages/3.13/bioc/html/flowClust.html

License

Artistic-2.0

Recipe

/bioconductor-flowclust/meta.yaml

Robust model-based clustering using a t-mixture model with Box-Cox transformation. Note: users should have GSL installed. Windows users: 'consult the README file available in the inst directory of the source distribution for necessary configuration instructions'.

package bioconductor-flowclust

Versions

3.30.0-0,  3.28.0-2,  3.28.0-1,  3.28.0-0,  3.26.0-0,  3.24.0-0,  3.22.0-1,  3.20.0-0

Depends

• bioconductor-biobase >=2.52.0,<2.53.0

• bioconductor-biocgenerics >=0.38.0,<0.39.0

• bioconductor-flowcore >=2.4.0,<2.5.0

• bioconductor-flowviz >=1.56.0,<1.57.0

• bioconductor-graph >=1.70.0,<1.71.0

• libblas >=3.8.0,<4.0a0

• libgcc-ng >=9.3.0

• liblapack >=3.8.0,<4.0a0

• r-base >=4.1,<4.2.0a0

• r-clue

• r-corpcor

• r-ellipse

• r-mnormt

Required By

• bioconductor-opencyto

• bioconductor-flowmerge

• bioconductor-flowtrans

• bioconductor-confess

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-flowclust

and update with:

conda update bioconductor-flowclust

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-flowclust:<tag>

(see bioconductor-flowclust/tags for valid values for <tag>)

Download stats

Link to this page

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