recipe bioconductor-flowcore

Provides S4 data structures and basic functions to deal with flow cytometry data.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/flowCore.html

License

Artistic-2.0

Recipe

/bioconductor-flowcore/meta.yaml

Links

biotools: flowcore, doi: 10.1186/1471-2105-10-106

package bioconductor-flowcore

Versions

1.48.1-0, 1.48.0-0, 1.46.2-0, 1.44.0-0, 1.42.3-0, 1.42.0-0, 1.38.2-1, 1.38.2-0

Depends

• bioconductor-biobase >=2.42.0,<2.43.0

• bioconductor-biocgenerics >=0.28.0,<0.29.0

• bioconductor-graph >=1.60.0,<1.61.0

• libgcc-ng >=7.3.0

• libstdcxx-ng >=7.3.0

• r-base >=3.5.1,<3.5.2.0a0

• r-bh >=1.65.0.1

• r-corpcor

• r-mass

• r-matrixstats

• r-rcpp

• r-rrcov

Required By

• bioconductor-ncdfflow

• bioconductor-flowfp

• bioconductor-flowfit

• bioconductor-hdcytodata

• bioconductor-immunoclust

• bioconductor-flowtime

• bioconductor-onesense

• bioconductor-flowstats

• bioconductor-flowsom

• bioconductor-qualifier

• bioconductor-flowfitexampledata

• bioconductor-immunespacer

• bioconductor-healthyflowdata

• bioconductor-flowdensity

• bioconductor-flowmerge

• ig-checkfcs

• bioconductor-platecore

• bioconductor-flowbeads

• bioconductor-flowtype

• bioconductor-confess

• bioconductor-flowworkspace

• bioconductor-flowq

• bioconductor-flowmeans

• bioconductor-diffcyt

• bioconductor-flowploidy

• ig-flowtools

• bioconductor-flowutils

• bioconductor-flowtrans

• bioconductor-flowviz

• bioconductor-opencyto

• bioconductor-flowbin

• bioconductor-cydar

• bioconductor-sconify

• bioconductor-flowmatch

• ig-checkflowtypes

• bioconductor-flowclean

• bioconductor-flowclust

• bioconductor-flowvs

• bioconductor-flowqb

• bioconductor-cytoml

• bioconductor-ddpcrclust

• bioconductor-flowai

• bioconductor-flowchic

• bioconductor-cytodx

• bioconductor-catalyst

• bioconductor-metacyto

• bioconductor-ggcyto

• bioconductor-gatefinder

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-flowcore

and update with:

conda update bioconductor-flowcore

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-flowcore:<tag>

(see bioconductor-flowcore/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-flowcore/README.html)