recipe bioconductor-flowcore

Provides S4 data structures and basic functions to deal with flow cytometry data.

Homepage:https://bioconductor.org/packages/3.8/bioc/html/flowCore.html License:Artistic-2.0 Recipe:/bioconductor-flowcore/meta.yaml Links:biotools: flowcore, doi: 10.1186/1471-2105-10-106

package bioconductor-flowcore

Versions:

1.48.0-0, 1.46.2-0, 1.44.0-0, 1.42.3-0, 1.42.0-0, 1.38.2-1, 1.38.2-0

Depends:

• bioconductor-biobase >=2.42.0,<2.43.0
• bioconductor-biocgenerics >=0.28.0,<0.29.0
• bioconductor-graph >=1.60.0,<1.61.0
• libcxx >=4.0.1
• r-base >=3.5.1,<3.5.2.0a0
• r-bh >=1.65.0.1
• r-corpcor
• r-mass
• r-matrixstats
• r-rcpp
• r-rrcov

Required By:

• bioconductor-qualifier
• ig-checkflowtypes
• bioconductor-flowbeads
• bioconductor-metacyto
• bioconductor-ncdfflow
• bioconductor-flowdensity
• bioconductor-flowfit
• bioconductor-flowstats
• bioconductor-cydar
• bioconductor-flowqb
• bioconductor-flowploidy
• bioconductor-flowmerge
• bioconductor-flowtype
• bioconductor-flowutils
• bioconductor-hdcytodata
• bioconductor-flowfitexampledata
• bioconductor-flowviz
• bioconductor-confess
• bioconductor-ddpcrclust
• ig-flowtools
• bioconductor-flowworkspace
• bioconductor-flowclust
• bioconductor-flowchic
• bioconductor-flowfp
• bioconductor-healthyflowdata
• bioconductor-flowbin
• bioconductor-platecore
• bioconductor-catalyst
• bioconductor-ggcyto
• bioconductor-gatefinder
• bioconductor-sconify
• bioconductor-flowtime
• bioconductor-flowtrans
• bioconductor-opencyto
• bioconductor-flowclean
• bioconductor-diffcyt
• bioconductor-flowmeans
• bioconductor-flowai
• bioconductor-flowsom
• bioconductor-onesense
• bioconductor-cytodx
• bioconductor-flowmatch
• ig-checkfcs
• bioconductor-flowvs
• bioconductor-immunoclust
• bioconductor-cytoml
• bioconductor-flowq

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-flowcore

and update with:

conda update bioconductor-flowcore

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-flowcore:<tag>

(see bioconductor-flowcore/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-flowcore/README.html)