recipe bioconductor-flowdensity

This package provides tools for automated sequential gating analogous to the manual gating strategy based on the density of the data.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/flowDensity.html

License

Artistic-2.0

Recipe

/bioconductor-flowdensity/meta.yaml

Links

biotools: flowdensity, doi: 10.1093/bioinformatics/btu677

package bioconductor-flowdensity

(downloads) docker_bioconductor-flowdensity

Versions

1.16.1-0, 1.16.0-0, 1.14.0-0, 1.12.0-0, 1.10.0-0, 1.6.0-0

Depends bioconductor-flowcore

>=1.48.0,<1.49.0

Depends bioconductor-flowworkspace

>=3.30.0,<3.31.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-car

Depends r-gplots

Depends r-rfoc

Depends r-rgeos

Depends r-sp

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-flowdensity

and update with:

conda update bioconductor-flowdensity

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-flowdensity:<tag>

(see bioconductor-flowdensity/tags for valid values for <tag>)