recipe bioconductor-flowfp

Fingerprinting for Flow Cytometry

Homepage:

https://bioconductor.org/packages/3.18/bioc/html/flowFP.html

License:

Artistic-2.0

Recipe:

/bioconductor-flowfp/meta.yaml

Links:

biotools: flowfp, doi: 10.1155/2009/193947

Fingerprint generation of flow cytometry data, used to facilitate the application of machine learning and datamining tools for flow cytometry.

package bioconductor-flowfp

versions:

1.64.0-0,  1.60.0-1,  1.60.0-0,  1.58.0-0,  1.55.0-1,  1.55.0-0,  1.52.0-2,  1.52.0-1,  1.52.0-0, 

1.64.0-0,  1.60.0-1,  1.60.0-0,  1.58.0-0,  1.55.0-1,  1.55.0-0,  1.52.0-2,  1.52.0-1,  1.52.0-0,  1.50.0-0,  1.48.0-2,  1.48.0-1,  1.48.0-0,  1.46.0-0,  1.44.0-0,  1.42.0-1,  1.40.0-0,  1.38.0-0,  1.36.0-0,  1.34.0-0,  1.32.0-0

depends bioconductor-biobase:

>=2.66.0,<2.67.0

depends bioconductor-biobase:

>=2.66.0,<2.67.0a0

depends bioconductor-biocgenerics:

>=0.52.0,<0.53.0

depends bioconductor-biocgenerics:

>=0.52.0,<0.53.0a0

depends bioconductor-flowcore:

>=2.18.0,<2.19.0

depends bioconductor-flowcore:

>=2.18.0,<2.19.0a0

depends bioconductor-flowviz:

>=1.70.0,<1.71.0

depends bioconductor-flowviz:

>=1.70.0,<1.71.0a0

depends libblas:

>=3.9.0,<4.0a0

depends libgcc:

>=13

depends liblapack:

>=3.9.0,<4.0a0

depends r-base:

>=4.4,<4.5.0a0

requirements:

additional platforms:

linux-aarch64

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-flowfp

and update with::

   mamba update bioconductor-flowfp

To create a new environment, run:

mamba create --name myenvname bioconductor-flowfp

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/bioconductor-flowfp:<tag>

(see `bioconductor-flowfp/tags`_ for valid values for ``<tag>``)

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[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-flowfp/README.html)