recipe bioconductor-flowviz

Visualization for flow cytometry

Homepage

https://bioconductor.org/packages/3.12/bioc/html/flowViz.html

License

Artistic-2.0

Recipe

/bioconductor-flowviz/meta.yaml

Links

biotools: flowviz, doi: 10.1093/bioinformatics/btn021

Provides visualization tools for flow cytometry data.

package bioconductor-flowviz

Versions

1.54.0-0,  1.52.0-0,  1.50.0-0,  1.48.0-1,  1.46.1-0,  1.46.0-0,  1.44.0-0,  1.42.0-0,  1.40.0-0, 

1.54.0-0,  1.52.0-0,  1.50.0-0,  1.48.0-1,  1.46.1-0,  1.46.0-0,  1.44.0-0,  1.42.0-0,  1.40.0-0,  1.38.0-0

Depends

• bioconductor-biobase >=2.50.0,<2.51.0

• bioconductor-flowcore >=2.2.0,<2.3.0

• r-base >=4.0,<4.1.0a0

• r-hexbin

• r-idpmisc

• r-kernsmooth

• r-lattice

• r-latticeextra

• r-mass

• r-rcolorbrewer

Required By

• bioconductor-opencyto

• ig-flowtools

• bioconductor-flowfp

• bioconductor-flowdensity

• bioconductor-flowclust

• bioconductor-flowtrans

• bioconductor-flowstats

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-flowviz

and update with:

conda update bioconductor-flowviz

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-flowviz:<tag>

(see bioconductor-flowviz/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-flowviz/README.html)