bioconductor-gaga

downloads

Implements the GaGa model for high-throughput data analysis, including differential expression analysis, supervised gene clustering and classification. Additionally, it performs sequential sample size calculations using the GaGa and LNNGV models (the latter from EBarrays package).

Home http://bioconductor.org/packages/3.6/bioc/html/gaga.html
Versions 2.22.0, 2.24.0
License GPL (>= 2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-gaga

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-gaga

and update with:

conda update bioconductor-gaga

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-gaga.