bioconductor-gcrisprtools¶
Set of tools for evaluating pooled high-throughput screening experiments, typically employing CRISPR/Cas9 or shRNA expression cassettes. Contains methods for interrogating library and cassette behavior within an experiment, identifying differentially abundant cassettes, aggregating signals to identify candidate targets for empirical validation, hypothesis testing, and comprehensive reporting.
| Home | http://bioconductor.org/packages/3.7/bioc/html/gCrisprTools.html |
| Versions | 1.8.0, 1.6.0 |
| License | Artistic-2.0 |
| Recipe | https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-gcrisprtools |
| Links | biotools: gcrisprtools, doi: 10.1038/nmeth.3252 |
Installation¶
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-gcrisprtools
and update with:
conda update bioconductor-gcrisprtools
A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-gcrisprtools.
Link to this page¶
Render an 
badge with the following Markdown:
[](http://bioconda.github.io/recipes/bioconductor-gcrisprtools/README.html)
