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recipe
bioconductor-gcrisprtools¶ Set of tools for evaluating pooled high-throughput screening experiments, typically employing CRISPR/Cas9 or shRNA expression cassettes. Contains methods for interrogating library and cassette behavior within an experiment, identifying differentially abundant cassettes, aggregating signals to identify candidate targets for empirical validation, hypothesis testing, and comprehensive reporting.
Homepage: https://bioconductor.org/packages/3.8/bioc/html/gCrisprTools.html License: Artistic-2.0 Recipe: /bioconductor-gcrisprtools/meta.yaml Links: biotools: gcrisprtools, doi: 10.1038/nmeth.3252
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package
bioconductor-gcrisprtools¶ 
Versions: 1.10.0-0, 1.8.0-0, 1.6.0-0
Depends: - bioconductor-biobase >=2.42.0,<2.43.0
- bioconductor-limma >=3.38.0,<3.39.0
- bioconductor-panther.db >=1.0.0,<1.1.0
- r-base >=3.5.1,<3.5.2.0a0
- r-ggplot2
- r-rmarkdown
- r-robustrankaggreg
Required By: Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-gcrisprtools
and update with:
conda update bioconductor-gcrisprtools
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-gcrisprtools:<tag>
(see bioconductor-gcrisprtools/tags for valid values for
<tag>)
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-gcrisprtools/README.html)