recipe bioconductor-gcrma

Background adjustment using sequence information

Homepage

https://bioconductor.org/packages/3.9/bioc/html/gcrma.html

License

LGPL

Recipe

/bioconductor-gcrma/meta.yaml

Links

biotools: gcrma, doi: 10.1186/1471-2105-9-452

package bioconductor-gcrma

(downloads) docker_bioconductor-gcrma

Versions

2.54.0-0, 2.52.0-0, 2.50.0-0, 2.48.0-0

Depends bioconductor-affy

>=1.60.0,<1.61.0

Depends bioconductor-affyio

>=1.52.0,<1.53.0

Depends bioconductor-biobase

>=2.42.0,<2.43.0

Depends bioconductor-biostrings

>=2.50.0,<2.51.0

Depends bioconductor-xvector

>=0.22.0,<0.23.0

Depends libgcc-ng

>=7.3.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-biocmanager

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-gcrma

and update with:

conda update bioconductor-gcrma

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gcrma:<tag>

(see bioconductor-gcrma/tags for valid values for <tag>)