recipe bioconductor-gcrma

Background Adjustment Using Sequence Information

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/gcrma.html

License:

LGPL

Recipe:

/bioconductor-gcrma/meta.yaml

Links:

biotools: gcrma, doi: 10.1186/1471-2105-9-452

Background adjustment using sequence information

package bioconductor-gcrma

Versions:

2.70.0-0,  2.66.0-2,  2.66.0-1,  2.66.0-0,  2.64.0-0,  2.62.0-1,  2.62.0-0,  2.60.0-0,  2.58.0-0, 

2.70.0-0,  2.66.0-2,  2.66.0-1,  2.66.0-0,  2.64.0-0,  2.62.0-1,  2.62.0-0,  2.60.0-0,  2.58.0-0,  2.56.0-1,  2.54.0-0,  2.52.0-0,  2.50.0-0,  2.48.0-0

Depends:

• bioconductor-affy >=1.76.0,<1.77.0

• bioconductor-affyio >=1.68.0,<1.69.0

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-biostrings >=2.66.0,<2.67.0

• bioconductor-xvector >=0.38.0,<0.39.0

• libblas >=3.9.0,<4.0a0

• libgcc-ng >=12

• liblapack >=3.9.0,<4.0a0

• r-base >=4.2,<4.3.0a0

• r-biocmanager

Required By:

• bioconductor-affyilm

• bioconductor-webbioc

• bioconductor-bgx

• bioconductor-affycoretools

• bioconductor-affylmgui

• bioconductor-maskbad

• bioconductor-affyplm

• bioconductor-mapredictdsc

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-gcrma

and update with:

conda update bioconductor-gcrma

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gcrma:<tag>

(see bioconductor-gcrma/tags for valid values for <tag>)

Download stats

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