recipe bioconductor-geneoverlap

Test and visualize gene overlaps

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/GeneOverlap.html

License:

GPL-3

Recipe:

/bioconductor-geneoverlap/meta.yaml

Links:

biotools: geneoverlap, doi: 10.1167/iovs.16-20618

Test two sets of gene lists and visualize the results.

package bioconductor-geneoverlap

Versions:

1.34.0-0,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.23.0-0,  1.22.0-0,  1.20.0-1,  1.20.0-0, 

1.34.0-0,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.23.0-0,  1.22.0-0,  1.20.0-1,  1.20.0-0,  1.18.0-0,  1.16.0-0,  1.14.0-0

Depends:

• r-base >=4.2,<4.3.0a0

• r-gplots

• r-rcolorbrewer

Required By:

• bioconductor-ataccogaps

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-geneoverlap

and update with:

conda update bioconductor-geneoverlap

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-geneoverlap:<tag>

(see bioconductor-geneoverlap/tags for valid values for <tag>)

Download stats

Link to this page

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