recipe bioconductor-geneplotter

Graphics related functions for Bioconductor

Homepage

https://bioconductor.org/packages/3.11/bioc/html/geneplotter.html

License

Artistic-2.0

Recipe

/bioconductor-geneplotter/meta.yaml

Links

biotools: geneplotter, doi: 10.1038/nmeth.3252

Functions for plotting genomic data

package bioconductor-geneplotter

Versions

1.66.0-0,  1.64.0-0,  1.62.0-1,  1.60.0-0,  1.58.0-0,  1.56.0-0,  1.54.0-0,  1.50.0-0,  1.48.0-0, 

1.66.0-0,  1.64.0-0,  1.62.0-1,  1.60.0-0,  1.58.0-0,  1.56.0-0,  1.54.0-0,  1.50.0-0,  1.48.0-0,  1.46.0-0

Depends

• bioconductor-annotate >=1.66.0,<1.67.0

• bioconductor-annotationdbi >=1.50.0,<1.51.0

• bioconductor-biobase >=2.48.0,<2.49.0

• bioconductor-biocgenerics >=0.34.0,<0.35.0

• r-base >=4.0,<4.1.0a0

• r-lattice

• r-rcolorbrewer

Required By

• bioconductor-enrichmentbrowser

• xtail

• bioconductor-dexseq

• bioconductor-methylseekr

• bioconductor-hiiragi2013

• bioconductor-hd2013sgi

• bioconductor-deseq

• bioconductor-rnainteract

• bioconductor-biocgraph

• bioconductor-junctionseq

• bioconductor-rnaither

• bioconductor-isogenegui

• bioconductor-deseq2

• bioconductor-enmix

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-geneplotter

and update with:

conda update bioconductor-geneplotter

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-geneplotter:<tag>

(see bioconductor-geneplotter/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-geneplotter/README.html)