recipe bioconductor-gmicr

Combines WGCNA and xCell readouts with bayesian network learrning to generate a Gene-Module Immune-Cell network (GMIC)

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/GmicR.html

License:

GPL-2 + file LICENSE

Recipe:

/bioconductor-gmicr/meta.yaml

This package uses bayesian network learning to detect relationships between Gene Modules detected by WGCNA and immune cell signatures defined by xCell. It is a hypothesis generating tool.

package bioconductor-gmicr

(downloads) docker_bioconductor-gmicr

Versions:

1.12.0-01.8.0-01.6.0-01.4.0-11.4.0-01.2.0-01.0.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-gmicr

and update with:

conda update bioconductor-gmicr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gmicr:<tag>

(see bioconductor-gmicr/tags for valid values for <tag>)

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