recipe bioconductor-golubesets

exprSets for golub leukemia data

Homepage:

https://bioconductor.org/packages/3.18/data/experiment/html/golubEsets.html

License:

LGPL

Recipe:

/bioconductor-golubesets/meta.yaml

representation of public golub data with some covariate data of provenance unknown to the maintainer at present; now employs ExpressionSet format

package bioconductor-golubesets

(downloads) docker_bioconductor-golubesets

versions:
1.44.0-0,  1.42.0-0,  1.40.0-0,  1.36.0-1,  1.36.0-0,  1.34.0-0,  1.32.0-1,  1.32.0-0,  1.30.0-0, 

1.44.0-0,  1.42.0-0,  1.40.0-0,  1.36.0-1,  1.36.0-0,  1.34.0-0,  1.32.0-1,  1.32.0-0,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.24.0-0,  1.22.0-0,  1.20.0-0

depends bioconductor-biobase:

>=2.62.0,<2.63.0

depends bioconductor-data-packages:

>=20231203

depends curl:

depends r-base:

>=4.3,<4.4.0a0

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-golubesets

and update with::

   mamba update bioconductor-golubesets

To create a new environment, run:

mamba create --name myenvname bioconductor-golubesets

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/bioconductor-golubesets:<tag>

(see `bioconductor-golubesets/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-golubesets/README.html)