recipe bioconductor-graph

A package that implements some simple graph handling capabilities.

Homepage:https://bioconductor.org/packages/3.8/bioc/html/graph.html License:Artistic-2.0 Recipe:/bioconductor-graph/meta.yaml Links:biotools: graph, doi: 10.1038/nmeth.3252

package bioconductor-graph

Versions:

1.60.0-0, 1.58.2-0, 1.56.0-0, 1.54.0-0, 1.50.0-1, 1.48.0-1, 1.48.0-0

Depends:

• bioconductor-biocgenerics >=0.28.0,<0.29.0
• libgcc-ng >=7.3.0
• r-base >=3.5.1,<3.5.2.0a0

Required By:

• bioconductor-eventpointer
• bioconductor-ppistats
• bioconductor-pwomics
• bioconductor-hypergraph
• bioconductor-ppidata
• bioconductor-pkgdeptools
• bioconductor-organismdbi
• bioconductor-analysispageserver
• bioconductor-mvgst
• bioconductor-gwascat
• bioconductor-gosim
• bioconductor-kegggraph
• bioconductor-variantfiltering
• bioconductor-rtreemix
• bioconductor-chimeraviz
• bioconductor-oncosimulr
• bioconductor-gseabase
• bioconductor-qpgraph
• bioconductor-gage
• bioconductor-cytoml
• bioconductor-enrichmentbrowser
• bioconductor-pathview
• bioconductor-flowutils
• bioconductor-rbcbook1
• bioconductor-migsa
• uropa
• bioconductor-nem
• bioconductor-sradb
• bioconductor-degraph
• bioconductor-category
• bioconductor-rgraph2js
• bioconductor-phenstat
• bioconductor-netresponse
• bioconductor-biomvcclass
• bioconductor-pcpheno
• bioconductor-alpine
• bioconductor-rdavidwebservice
• bioconductor-gostats
• bioconductor-clipper
• bioconductor-splicinggraphs
• bioconductor-signet
• bioconductor-ncigraph
• bioconductor-streamer
• bioconductor-rcyjs
• bioconductor-keggorthology
• bioconductor-cnorfeeder
• bioconductor-camera
• bioconductor-rchyoptimyx
• bioconductor-chippeakanno
• bioconductor-categorycompare
• bioconductor-hyperdraw
• bioconductor-vtpnet
• bioconductor-htsanalyzer
• bioconductor-gaggle
• bioconductor-cellnoptr
• bioconductor-rcytoscape
• bioconductor-trackviewer
• r-dnet
• r-grbase
• bioconductor-rgraphviz
• bioconductor-rpsixml
• bioconductor-mineica
• bioconductor-ramigo
• bioconductor-dapar
• bioconductor-apcomplex
• bioconductor-flowmerge
• bioconductor-mirintegrator
• bioconductor-topaseq
• bioconductor-rbioinf
• bioconductor-biocviews
• bioconductor-graphat
• bioconductor-neighbornet
• bioconductor-grridge
• bioconductor-biocgraph
• bioconductor-gofunction
• bioconductor-genenetworkbuilder
• bioconductor-flowclust
• bioconductor-flowcl
• bioconductor-flowworkspace
• r-grain
• bioconductor-rbgl
• bioconductor-chronos
• bioconductor-topgo
• bioconductor-bionet
• r-hemdag
• bioconductor-blma
• bioconductor-graphite
• bioconductor-desubs
• bioconductor-netsam
• bioconductor-rontotools
• bioconductor-rcy3
• r-perfmeas
• bioconductor-maigespack
• bioconductor-pigengene
• bioconductor-bgeedb
• bioconductor-fem
• bioconductor-pathrender
• bioconductor-experimenthubdata
• bioconductor-opencyto
• bioconductor-bioccheck
• bioconductor-snadata
• bioconductor-flowcore
• bioconductor-yeastexpdata

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-graph

and update with:

conda update bioconductor-graph

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-graph:<tag>

(see bioconductor-graph/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-graph/README.html)