recipe bioconductor-grenits

Gene Regulatory Network Inference Using Time Series

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/GRENITS.html

License:

GPL (>= 2)

Recipe:

/bioconductor-grenits/meta.yaml

The package offers four network inference statistical models using Dynamic Bayesian Networks and Gibbs Variable Selection: a linear interaction model, two linear interaction models with added experimental noise (Gaussian and Student distributed) for the case where replicates are available and a non-linear interaction model.

package bioconductor-grenits

(downloads) docker_bioconductor-grenits

Versions:
1.50.0-01.46.0-21.46.0-11.46.0-01.44.0-01.42.0-11.42.0-01.40.0-01.38.0-0

1.50.0-01.46.0-21.46.0-11.46.0-01.44.0-01.42.0-11.42.0-01.40.0-01.38.0-01.36.0-01.34.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-grenits

and update with:

conda update bioconductor-grenits

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-grenits:<tag>

(see bioconductor-grenits/tags for valid values for <tag>)

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