recipe bioconductor-grenits

Gene Regulatory Network Inference Using Time Series

Homepage

https://bioconductor.org/packages/3.11/bioc/html/GRENITS.html

License

GPL (>= 2)

Recipe

/bioconductor-grenits/meta.yaml

The package offers four network inference statistical models using Dynamic Bayesian Networks and Gibbs Variable Selection: a linear interaction model, two linear interaction models with added experimental noise (Gaussian and Student distributed) for the case where replicates are available and a non-linear interaction model.

package bioconductor-grenits

(downloads) docker_bioconductor-grenits

Versions

1.40.0-0, 1.38.0-0, 1.36.0-0, 1.34.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-grenits

and update with:

conda update bioconductor-grenits

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-grenits:<tag>

(see bioconductor-grenits/tags for valid values for <tag>)