Package Recipe 'bioconductor-gse103322'

recipe bioconductor-gse103322

GEO accession data GSE103322 as a SingleCellExperiment

Homepage:: https://bioconductor.org/packages/3.16/data/experiment/html/GSE103322.html
License:: Artistic-2.0
Recipe:: /bioconductor-gse103322/meta.yaml

Single cell RNA-Seq data for 5902 cells from 18 patients with oral cavity head and neck squamous cell carcinoma available as GEO accession [GSE103322] (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE103322). GSE103322 data have been parsed into a SincleCellExperiment object available in ExperimentHub.

package bioconductor-gse103322¶

Versions:

1.4.0-0, 1.0.0-1, 1.0.0-0

Depends:

bioconductor-biobase >=2.58.0,<2.59.0
bioconductor-data-packages >=20221104
bioconductor-geoquery >=2.66.0,<2.67.0
curl
r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-gse103322

and update with:

conda update bioconductor-gse103322

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gse103322:<tag>

(see bioconductor-gse103322/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-gse103322/README.html)