recipe bioconductor-gse103322

GEO accession data GSE103322 as a SingleCellExperiment

Homepage

https://bioconductor.org/packages/3.14/data/experiment/html/GSE103322.html

License

Artistic-2.0

Recipe

/bioconductor-gse103322/meta.yaml

Single cell RNA-Seq data for 5902 cells from 18 patients with oral cavity head and neck squamous cell carcinoma available as GEO accession [GSE103322] (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE103322). GSE103322 data have been parsed into a SincleCellExperiment object available in ExperimentHub.

package bioconductor-gse103322

Versions

1.0.0-0

Depends

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-geoquery >=2.62.0,<2.63.0

• curl >=7.79.1,<8.0a0

• r-base >=4.1,<4.2.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-gse103322

and update with:

conda update bioconductor-gse103322

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gse103322:<tag>

(see bioconductor-gse103322/tags for valid values for <tag>)

Download stats

Link to this page

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