recipe bioconductor-gse13015

GEO accession data GSE13015_GPL6106 as a SummarizedExperiment

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/GSE13015.html

License:

MIT License

Recipe:

/bioconductor-gse13015/meta.yaml

Microarray expression matrix platform GPL6106 and clinical data for 67 septicemic patients and made them available as GEO accession [GSE13015](https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE13015). GSE13015 data have been parsed into a SummarizedExperiment object available in ExperimentHub. This data data could be used as an example supporting BloodGen3Module R package.

package bioconductor-gse13015

Versions:

1.6.0-0,  1.2.0-1,  1.2.0-0,  1.0.0-0

Depends:

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-data-packages >=20221106

• bioconductor-geoquery >=2.66.0,<2.67.0

• bioconductor-preprocesscore >=1.60.0,<1.61.0

• bioconductor-summarizedexperiment >=1.28.0,<1.29.0

• curl

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-gse13015

and update with:

conda update bioconductor-gse13015

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gse13015:<tag>

(see bioconductor-gse13015/tags for valid values for <tag>)

Download stats

Link to this page

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