-
recipe
bioconductor-gwascat¶ Represent and model data in the EMBL-EBI GWAS catalog.
- Homepage
https://bioconductor.org/packages/3.9/bioc/html/gwascat.html
- License
Artistic-2.0
- Recipe
-
package
bioconductor-gwascat¶ 
- Versions
2.14.0-0
- Depends bioconductor-annotationdbi
>=1.44.0,<1.45.0
- Depends bioconductor-annotationhub
>=2.14.0,<2.15.0
- Depends bioconductor-biocgenerics
>=0.28.0,<0.29.0
- Depends bioconductor-biostrings
>=2.50.0,<2.51.0
- Depends bioconductor-genomeinfodb
>=1.18.0,<1.19.0
- Depends bioconductor-genomicfeatures
>=1.34.0,<1.35.0
- Depends bioconductor-genomicranges
>=1.34.0,<1.35.0
- Depends bioconductor-ggbio
>=1.30.0,<1.31.0
- Depends bioconductor-gqtlstats
>=1.14.0,<1.15.0
- Depends bioconductor-graph
>=1.60.0,<1.61.0
- Depends bioconductor-gviz
>=1.26.0,<1.27.0
- Depends bioconductor-homo.sapiens
>=1.3.0,<1.4.0
- Depends bioconductor-iranges
>=2.16.0,<2.17.0
- Depends bioconductor-rsamtools
>=1.34.0,<1.35.0
- Depends bioconductor-rtracklayer
>=1.42.0,<1.43.0
- Depends bioconductor-s4vectors
>=0.20.0,<0.21.0
- Depends bioconductor-snpstats
>=1.32.0,<1.33.0
- Depends bioconductor-summarizedexperiment
>=1.12.0,<1.13.0
- Depends bioconductor-variantannotation
>=1.28.0,<1.29.0
- Depends r-base
>=3.5.1,<3.5.2.0a0
- Depends r-ggplot2
- Requirements
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-gwascat
and update with:
conda update bioconductor-gwascat
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-gwascat:<tag>
(see bioconductor-gwascat/tags for valid values for
<tag>)
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-gwascat/README.html)