recipe bioconductor-gwascat

representing and modeling data in the EMBL-EBI GWAS catalog

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/gwascat.html

License:

Artistic-2.0

Recipe:

/bioconductor-gwascat/meta.yaml

Represent and model data in the EMBL-EBI GWAS catalog.

package bioconductor-gwascat

Versions:

2.30.0-0,  2.26.0-0,  2.24.0-0,  2.22.0-1,  2.22.0-0,  2.20.1-0,  2.18.0-0,  2.16.0-1,  2.14.0-0

Depends:

• bioconductor-annotationdbi >=1.60.0,<1.61.0

• bioconductor-annotationhub >=3.6.0,<3.7.0

• bioconductor-biocfilecache >=2.6.0,<2.7.0

• bioconductor-biostrings >=2.66.0,<2.67.0

• bioconductor-genomeinfodb >=1.34.0,<1.35.0

• bioconductor-genomicfeatures >=1.50.0,<1.51.0

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-iranges >=2.32.0,<2.33.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• bioconductor-snpstats >=1.48.0,<1.49.0

• bioconductor-variantannotation >=1.44.0,<1.45.0

• r-base >=4.2,<4.3.0a0

• r-readr

Required By:

• bioconductor-vtpnet

• bioconductor-circrnaprofiler

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-gwascat

and update with:

conda update bioconductor-gwascat

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gwascat:<tag>

(see bioconductor-gwascat/tags for valid values for <tag>)

Download stats

Link to this page

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