recipe bioconductor-gwasurvivr

gwasurvivr is a package to perform survival analysis using Cox proportional hazard models on imputed genetic data.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/gwasurvivr.html

License

Artistic-2.0

Recipe

/bioconductor-gwasurvivr/meta.yaml

package bioconductor-gwasurvivr

(downloads) docker_bioconductor-gwasurvivr

Versions

1.0.0-1, 1.0.0-0

Depends bioconductor-gwastools

>=1.28.0,<1.29.0

Depends bioconductor-snprelate

>=1.16.0,<1.17.0

Depends bioconductor-summarizedexperiment

>=1.12.0,<1.13.0

Depends bioconductor-variantannotation

>=1.28.0,<1.29.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-matrixstats

Depends r-survival

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-gwasurvivr

and update with:

conda update bioconductor-gwasurvivr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gwasurvivr:<tag>

(see bioconductor-gwasurvivr/tags for valid values for <tag>)