recipe bioconductor-gwasurvivr

gwasurvivr: an R package for genome wide survival analysis

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/gwasurvivr.html

License:

Artistic-2.0

Recipe:

/bioconductor-gwasurvivr/meta.yaml

gwasurvivr is a package to perform survival analysis using Cox proportional hazard models on imputed genetic data.

package bioconductor-gwasurvivr

Versions:

1.16.0-0,  1.12.0-0,  1.10.0-0,  1.8.0-1,  1.8.0-0,  1.6.0-0,  1.4.0-0,  1.2.0-1,  1.0.0-1, 

1.16.0-0,  1.12.0-0,  1.10.0-0,  1.8.0-1,  1.8.0-0,  1.6.0-0,  1.4.0-0,  1.2.0-1,  1.0.0-1,  1.0.0-0

Depends:

• bioconductor-gwastools >=1.44.0,<1.45.0

• bioconductor-snprelate >=1.32.0,<1.33.0

• bioconductor-summarizedexperiment >=1.28.0,<1.29.0

• bioconductor-variantannotation >=1.44.0,<1.45.0

• r-base >=4.2,<4.3.0a0

• r-matrixstats

• r-survival

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-gwasurvivr

and update with:

conda update bioconductor-gwasurvivr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-gwasurvivr:<tag>

(see bioconductor-gwasurvivr/tags for valid values for <tag>)

Download stats

Link to this page

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