Package Recipe 'bioconductor-hcadata'

recipe bioconductor-hcadata

Accessing The Datasets Of The Human Cell Atlas in R/Bioconductor

Homepage: https://bioconductor.org/packages/3.13/data/experiment/html/HCAData.html
License: MIT + file LICENSE
Recipe: /bioconductor-hcadata/meta.yaml

This package allows a direct access to the dataset generated by the Human Cell Atlas project for further processing in R and Bioconductor, in the comfortable format of SingleCellExperiment objects (available in other formats here: http://preview.data.humancellatlas.org/).

package bioconductor-hcadata¶

Versions

1.8.0-0, 1.6.0-2, 1.6.0-1, 1.4.0-0, 1.2.0-0, 1.0.0-1

Depends

bioconductor-annotationhub >=3.0.0,<3.1.0
bioconductor-experimenthub >=2.0.0,<2.1.0
bioconductor-hdf5array >=1.20.0,<1.21.0
bioconductor-singlecellexperiment >=1.14.0,<1.15.0
curl >=7.77.0,<8.0a0
r-base >=4.1,<4.2.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-hcadata

and update with:

conda update bioconductor-hcadata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-hcadata:<tag>

(see bioconductor-hcadata/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-hcadata/README.html)