recipe bioconductor-hdcytodata

Data package containing a collection of high-dimensional cytometry benchmark datasets saved in SummarizedExperiment and flowSet Bioconductor object formats, including row and column metadata describing samples, cell populations (clusters), and protein markers.

Homepage

https://bioconductor.org/packages/3.9/data/experiment/html/HDCytoData.html

License

MIT + file LICENSE

Recipe

/bioconductor-hdcytodata/meta.yaml

package bioconductor-hdcytodata

(downloads) docker_bioconductor-hdcytodata

Versions

1.2.1-0

Depends bioconductor-experimenthub

>=1.8.0,<1.9.0

Depends bioconductor-flowcore

>=1.48.0,<1.49.0

Depends bioconductor-summarizedexperiment

>=1.12.0,<1.13.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends wget

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-hdcytodata

and update with:

conda update bioconductor-hdcytodata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-hdcytodata:<tag>

(see bioconductor-hdcytodata/tags for valid values for <tag>)