recipe bioconductor-helloranges

Translates bedtools command-line invocations to R code calling functions from the Bioconductor *Ranges infrastructure. This is intended to educate novice Bioconductor users and to compare the syntax and semantics of the two frameworks.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/HelloRanges.html

License

GPL (>= 2)

Recipe

/bioconductor-helloranges/meta.yaml

Links

biotools: helloranges, doi: 10.1038/nmeth.3252

package bioconductor-helloranges

(downloads) docker_bioconductor-helloranges

Versions

1.10.0-1, 1.8.0-0, 1.6.0-0, 1.4.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-helloranges

and update with:

conda update bioconductor-helloranges

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-helloranges:<tag>

(see bioconductor-helloranges/tags for valid values for <tag>)